Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm15370-201ENSMUST00000117158 253 ntBASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm28882-201ENSMUST00000185504 314 ntBASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm38266-201ENSMUST00000194931 421 ntBASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm35960-201ENSMUST00000202712 767 ntBASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm21769-201ENSMUST00000211922 111 ntBASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn3Q8BHH8 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Mir1938-201ENSMUST00000158746 100 ntBASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Gm5950-201ENSMUST00000213337 772 ntBASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.37□□□□□ -0.59
Clrn3Q8BHH8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms