Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shc4Q6S5L9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shc4Q6S5L9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shc4Q6S5L9 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.29□□□□□ -0.6
Shc4Q6S5L9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shc4Q6S5L9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shc4Q6S5L9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Shc4Q6S5L9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shc4Q6S5L9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shc4Q6S5L9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shc4Q6S5L9 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Gm22133-201ENSMUST00000102082 109 ntBASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shc4Q6S5L9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shc4Q6S5L9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Gm12380-201ENSMUST00000119012 544 ntBASIC11.27□□□□□ -0.61
Shc4Q6S5L9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Gm5616-201ENSMUST00000165252 384 ntBASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Gm18734-201ENSMUST00000172937 808 ntBASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Gm8741-201ENSMUST00000174736 384 ntBASIC11.27□□□□□ -0.61
Shc4Q6S5L9 AU022133-201ENSMUST00000200601 873 ntBASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Gm43947-201ENSMUST00000203019 959 ntBASIC11.27□□□□□ -0.61
Shc4Q6S5L9 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.27□□□□□ -0.61
Shc4Q6S5L9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shc4Q6S5L9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Shc4Q6S5L9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms