Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Gm14277-201ENSMUST00000121195 360 ntBASIC11.89□□□□□ -0.51
VclQ64727 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.89□□□□□ -0.51
VclQ64727 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.89□□□□□ -0.51
VclQ64727 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.89□□□□□ -0.51
VclQ64727 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.89□□□□□ -0.51
VclQ64727 Gm2260-201ENSMUST00000184965 657 ntBASIC11.89□□□□□ -0.51
VclQ64727 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.89□□□□□ -0.51
VclQ64727 Gm5363-201ENSMUST00000211927 938 ntBASIC11.89□□□□□ -0.51
VclQ64727 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.89□□□□□ -0.51
VclQ64727 Gm8385-201ENSMUST00000058999 643 ntBASIC11.89□□□□□ -0.51
VclQ64727 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
VclQ64727 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
VclQ64727 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.89□□□□□ -0.51
VclQ64727 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VclQ64727 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.88□□□□□ -0.51
VclQ64727 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.88□□□□□ -0.51
VclQ64727 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.88□□□□□ -0.51
VclQ64727 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
VclQ64727 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
VclQ64727 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.88□□□□□ -0.51
VclQ64727 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.88□□□□□ -0.51
VclQ64727 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.88□□□□□ -0.51
VclQ64727 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
VclQ64727 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
VclQ64727 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.88□□□□□ -0.51
VclQ64727 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.88□□□□□ -0.51
VclQ64727 Gm8913-201ENSMUST00000209491 641 ntBASIC11.88□□□□□ -0.51
VclQ64727 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.88□□□□□ -0.51
VclQ64727 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.88□□□□□ -0.51
VclQ64727 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
VclQ64727 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
VclQ64727 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
VclQ64727 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.88□□□□□ -0.51
VclQ64727 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.88□□□□□ -0.51
VclQ64727 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
VclQ64727 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.88□□□□□ -0.51
VclQ64727 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.88□□□□□ -0.51
VclQ64727 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.88□□□□□ -0.51
VclQ64727 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VclQ64727 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.87□□□□□ -0.51
VclQ64727 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.87□□□□□ -0.51
VclQ64727 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VclQ64727 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
VclQ64727 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.87□□□□□ -0.51
VclQ64727 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VclQ64727 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms