Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.14□□□□□ -0.47
Six4Q61321 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Six4Q61321 Gm2260-201ENSMUST00000184965 657 ntBASIC12.14□□□□□ -0.47
Six4Q61321 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.14□□□□□ -0.47
Six4Q61321 Gm17827-201ENSMUST00000211825 742 ntBASIC12.14□□□□□ -0.47
Six4Q61321 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.14□□□□□ -0.47
Six4Q61321 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.14□□□□□ -0.47
Six4Q61321 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.14□□□□□ -0.47
Six4Q61321 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Six4Q61321 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Six4Q61321 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.14□□□□□ -0.47
Six4Q61321 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Pck2-205ENSMUST00000226352 2784 ntBASIC12.14□□□□□ -0.47
Six4Q61321 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Six4Q61321 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.14□□□□□ -0.47
Six4Q61321 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.14□□□□□ -0.47
Six4Q61321 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.14□□□□□ -0.47
Six4Q61321 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Six4Q61321 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six4Q61321 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Six4Q61321 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Six4Q61321 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
Six4Q61321 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Six4Q61321 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Six4Q61321 Gm23949-201ENSMUST00000104027 127 ntBASIC12.13□□□□□ -0.47
Six4Q61321 Gm11509-201ENSMUST00000117358 325 ntBASIC12.13□□□□□ -0.47
Six4Q61321 Gm15711-201ENSMUST00000118889 535 ntBASIC12.13□□□□□ -0.47
Six4Q61321 Gm15004-201ENSMUST00000119192 630 ntBASIC12.13□□□□□ -0.47
Six4Q61321 Gm14017-201ENSMUST00000121934 386 ntBASIC12.13□□□□□ -0.47
Six4Q61321 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.13□□□□□ -0.47
Six4Q61321 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Gm27530-201ENSMUST00000184096 98 ntBASIC12.13□□□□□ -0.47
Six4Q61321 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.13□□□□□ -0.47
Six4Q61321 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.13□□□□□ -0.47
Six4Q61321 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Six4Q61321 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.13□□□□□ -0.47
Six4Q61321 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.12□□□□□ -0.47
Six4Q61321 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.12□□□□□ -0.47
Six4Q61321 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.12□□□□□ -0.47
Six4Q61321 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.12□□□□□ -0.47
Six4Q61321 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Six4Q61321 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.12□□□□□ -0.47
Six4Q61321 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.12□□□□□ -0.47
Six4Q61321 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms