Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Sssca1P56873 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.74□□□□□ -0.85
Sssca1P56873 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Sssca1P56873 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Sssca1P56873 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Sssca1P56873 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.73□□□□□ -0.85
Sssca1P56873 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Sssca1P56873 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.73□□□□□ -0.85
Sssca1P56873 Gm15806-201ENSMUST00000120696 955 ntBASIC9.73□□□□□ -0.85
Sssca1P56873 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Sssca1P56873 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Gm29649-201ENSMUST00000185649 419 ntBASIC9.73□□□□□ -0.85
Sssca1P56873 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.73□□□□□ -0.85
Sssca1P56873 Gm18584-201ENSMUST00000203098 964 ntBASIC9.73□□□□□ -0.85
Sssca1P56873 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.73□□□□□ -0.85
Sssca1P56873 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.73□□□□□ -0.85
Sssca1P56873 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sssca1P56873 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sssca1P56873 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.72□□□□□ -0.85
Sssca1P56873 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Sssca1P56873 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Sssca1P56873 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Sssca1P56873 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Sssca1P56873 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.72□□□□□ -0.85
Sssca1P56873 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Sssca1P56873 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Sssca1P56873 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Sssca1P56873 Gm23912-201ENSMUST00000104687 87 ntBASIC9.72□□□□□ -0.85
Sssca1P56873 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms