Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.26□□□□□ -0.45
Ddx6P54823 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx6P54823 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.26□□□□□ -0.45
Ddx6P54823 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.26□□□□□ -0.45
Ddx6P54823 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx6P54823 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx6P54823 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ddx6P54823 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx6P54823 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Ddx6P54823 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx6P54823 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ddx6P54823 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx6P54823 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ddx6P54823 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx6P54823 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx6P54823 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx6P54823 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx6P54823 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
Ddx6P54823 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Gm22920-201ENSMUST00000102175 109 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Gm12579-201ENSMUST00000118040 783 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Gm11956-201ENSMUST00000119525 512 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Gm14585-201ENSMUST00000120713 634 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ddx6P54823 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Gm44124-201ENSMUST00000204159 472 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Gm6108-201ENSMUST00000208365 367 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.25□□□□□ -0.45
Ddx6P54823 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Gm6867-201ENSMUST00000219165 425 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ddx6P54823 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ddx6P54823 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ddx6P54823 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.25□□□□□ -0.45
Ddx6P54823 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx6P54823 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Gm8731-201ENSMUST00000118088 412 ntBASIC12.24□□□□□ -0.45
Ddx6P54823 Gm11246-201ENSMUST00000120880 345 ntBASIC12.24□□□□□ -0.45
Ddx6P54823 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Gm27438-201ENSMUST00000183480 110 ntBASIC12.24□□□□□ -0.45
Ddx6P54823 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.24□□□□□ -0.45
Ddx6P54823 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ddx6P54823 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.24□□□□□ -0.45
Ddx6P54823 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx6P54823 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.24□□□□□ -0.45
Ddx6P54823 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.24□□□□□ -0.45
Ddx6P54823 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.24□□□□□ -0.45
Ddx6P54823 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ddx6P54823 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms