Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC18.25■□□□□ 0.51
Cux1P53564 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC18.25■□□□□ 0.51
Cux1P53564 Gm25554-201ENSMUST00000158075 113 ntBASIC18.25■□□□□ 0.51
Cux1P53564 Gm24679-201ENSMUST00000158762 111 ntBASIC18.25■□□□□ 0.51
Cux1P53564 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC18.25■□□□□ 0.51
Cux1P53564 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC18.25■□□□□ 0.51
Cux1P53564 Gm25053-202ENSMUST00000199731 132 ntBASIC18.25■□□□□ 0.51
Cux1P53564 CT009527.1-201ENSMUST00000224205 339 ntBASIC18.25■□□□□ 0.51
Cux1P53564 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux1P53564 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC18.25■□□□□ 0.51
Cux1P53564 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cux1P53564 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux1P53564 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux1P53564 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC18.25■□□□□ 0.51
Cux1P53564 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux1P53564 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cux1P53564 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cux1P53564 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux1P53564 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux1P53564 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cux1P53564 Gm5053-201ENSMUST00000208361 1678 ntBASIC18.25■□□□□ 0.51
Cux1P53564 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux1P53564 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cux1P53564 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cux1P53564 Gm15528-201ENSMUST00000117821 864 ntBASIC18.24■□□□□ 0.51
Cux1P53564 Gm7741-201ENSMUST00000181445 989 ntBASIC18.24■□□□□ 0.51
Cux1P53564 AC134248.1-201ENSMUST00000216113 1176 ntBASIC18.24■□□□□ 0.51
Cux1P53564 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Gm8146-201ENSMUST00000192106 1847 ntBASIC18.24■□□□□ 0.51
Cux1P53564 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Cux1P53564 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux1P53564 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Cux1P53564 Gm25545-201ENSMUST00000122673 323 ntBASIC18.23■□□□□ 0.51
Cux1P53564 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC18.23■□□□□ 0.51
Cux1P53564 Gm26989-201ENSMUST00000182608 749 ntBASIC18.23■□□□□ 0.51
Cux1P53564 Gm35713-201ENSMUST00000210516 199 ntBASIC18.23■□□□□ 0.51
Cux1P53564 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC18.23■□□□□ 0.51
Cux1P53564 AC154572.1-201ENSMUST00000226098 1204 ntBASIC18.23■□□□□ 0.51
Cux1P53564 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cux1P53564 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC18.23■□□□□ 0.51
Cux1P53564 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cux1P53564 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Gm7224-201ENSMUST00000121359 2066 ntBASIC18.23■□□□□ 0.51
Cux1P53564 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC18.23■□□□□ 0.51
Cux1P53564 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cux1P53564 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC18.23■□□□□ 0.51
Cux1P53564 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Gm45758-201ENSMUST00000212448 1006 ntBASIC18.23■□□□□ 0.51
Cux1P53564 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC18.23■□□□□ 0.51
Cux1P53564 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux1P53564 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC18.22■□□□□ 0.51
Cux1P53564 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC18.22■□□□□ 0.51
Cux1P53564 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cux1P53564 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Gm44056-201ENSMUST00000204623 1427 ntBASIC18.22■□□□□ 0.51
Cux1P53564 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Gm37600-201ENSMUST00000193764 3292 ntBASIC18.22■□□□□ 0.51
Cux1P53564 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cux1P53564 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux1P53564 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cux1P53564 Gm9673-201ENSMUST00000119287 781 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms