Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.46□□□□□ -0.57
RoraP51448 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.46□□□□□ -0.57
RoraP51448 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
RoraP51448 Gm7848-201ENSMUST00000210739 718 ntBASIC11.46□□□□□ -0.57
RoraP51448 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.46□□□□□ -0.57
RoraP51448 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.46□□□□□ -0.57
RoraP51448 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RoraP51448 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.46□□□□□ -0.58
RoraP51448 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RoraP51448 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
RoraP51448 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
RoraP51448 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RoraP51448 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RoraP51448 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
RoraP51448 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
RoraP51448 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
RoraP51448 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
RoraP51448 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
RoraP51448 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
RoraP51448 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
RoraP51448 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.45□□□□□ -0.58
RoraP51448 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
RoraP51448 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.45□□□□□ -0.58
RoraP51448 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.45□□□□□ -0.58
RoraP51448 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.45□□□□□ -0.58
RoraP51448 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
RoraP51448 Gm22902-201ENSMUST00000158488 302 ntBASIC11.45□□□□□ -0.58
RoraP51448 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.45□□□□□ -0.58
RoraP51448 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.45□□□□□ -0.58
RoraP51448 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
RoraP51448 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.45□□□□□ -0.58
RoraP51448 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.45□□□□□ -0.58
RoraP51448 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Gm5455-201ENSMUST00000058710 715 ntBASIC11.45□□□□□ -0.58
RoraP51448 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
RoraP51448 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
RoraP51448 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RoraP51448 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
RoraP51448 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.44□□□□□ -0.58
RoraP51448 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
RoraP51448 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.44□□□□□ -0.58
RoraP51448 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.44□□□□□ -0.58
RoraP51448 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RoraP51448 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
RoraP51448 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
RoraP51448 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.44□□□□□ -0.58
RoraP51448 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.44□□□□□ -0.58
RoraP51448 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.44□□□□□ -0.58
RoraP51448 Gm18038-201ENSMUST00000197900 485 ntBASIC11.44□□□□□ -0.58
RoraP51448 Gm42997-202ENSMUST00000200321 985 ntBASIC11.44□□□□□ -0.58
RoraP51448 Gm17827-201ENSMUST00000211825 742 ntBASIC11.44□□□□□ -0.58
RoraP51448 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.44□□□□□ -0.58
RoraP51448 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RoraP51448 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RoraP51448 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
RoraP51448 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RoraP51448 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms