Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.69□□□□□ -0.38
SftpdP50404 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SftpdP50404 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.69□□□□□ -0.38
SftpdP50404 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpdP50404 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.68□□□□□ -0.38
SftpdP50404 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.68□□□□□ -0.38
SftpdP50404 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SftpdP50404 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SftpdP50404 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.68□□□□□ -0.38
SftpdP50404 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.68□□□□□ -0.38
SftpdP50404 Gm5455-201ENSMUST00000058710 715 ntBASIC12.68□□□□□ -0.38
SftpdP50404 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.68□□□□□ -0.38
SftpdP50404 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.68□□□□□ -0.38
SftpdP50404 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SftpdP50404 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SftpdP50404 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpdP50404 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.67□□□□□ -0.38
SftpdP50404 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SftpdP50404 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.67□□□□□ -0.38
SftpdP50404 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.67□□□□□ -0.38
SftpdP50404 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.67□□□□□ -0.38
SftpdP50404 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.67□□□□□ -0.38
SftpdP50404 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.67□□□□□ -0.38
SftpdP50404 Gm18893-201ENSMUST00000198416 943 ntBASIC12.67□□□□□ -0.38
SftpdP50404 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.67□□□□□ -0.38
SftpdP50404 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.67□□□□□ -0.38
SftpdP50404 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SftpdP50404 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
SftpdP50404 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SftpdP50404 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SftpdP50404 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SftpdP50404 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
SftpdP50404 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.67□□□□□ -0.38
SftpdP50404 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SftpdP50404 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.67□□□□□ -0.38
SftpdP50404 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.67□□□□□ -0.38
SftpdP50404 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.67□□□□□ -0.38
SftpdP50404 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SftpdP50404 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SftpdP50404 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SftpdP50404 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
SftpdP50404 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.66□□□□□ -0.38
SftpdP50404 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.66□□□□□ -0.38
SftpdP50404 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.66□□□□□ -0.38
SftpdP50404 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.66□□□□□ -0.38
SftpdP50404 Gm35960-201ENSMUST00000202712 767 ntBASIC12.66□□□□□ -0.38
SftpdP50404 Gm4607-201ENSMUST00000206649 577 ntBASIC12.66□□□□□ -0.38
SftpdP50404 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.66□□□□□ -0.38
SftpdP50404 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SftpdP50404 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
SftpdP50404 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms