Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.7□□□□□ -0.54
Hnf4aP49698 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Gm7399-201ENSMUST00000032395 858 ntBASIC11.7□□□□□ -0.54
Hnf4aP49698 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Hnf4aP49698 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Hnf4aP49698 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Hnf4aP49698 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hnf4aP49698 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.7□□□□□ -0.54
Hnf4aP49698 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hnf4aP49698 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.69□□□□□ -0.54
Hnf4aP49698 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Hnf4aP49698 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Gm12241-201ENSMUST00000118330 726 ntBASIC11.69□□□□□ -0.54
Hnf4aP49698 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Gm6334-201ENSMUST00000207083 228 ntBASIC11.69□□□□□ -0.54
Hnf4aP49698 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.69□□□□□ -0.54
Hnf4aP49698 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hnf4aP49698 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hnf4aP49698 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Hnf4aP49698 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.68□□□□□ -0.54
Hnf4aP49698 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hnf4aP49698 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hnf4aP49698 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.68□□□□□ -0.54
Hnf4aP49698 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.68□□□□□ -0.54
Hnf4aP49698 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.68□□□□□ -0.54
Hnf4aP49698 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Gm30285-201ENSMUST00000214614 422 ntBASIC11.68□□□□□ -0.54
Hnf4aP49698 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.68□□□□□ -0.54
Hnf4aP49698 Gm19994-201ENSMUST00000217086 586 ntBASIC11.68□□□□□ -0.54
Hnf4aP49698 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.68□□□□□ -0.54
Hnf4aP49698 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.68□□□□□ -0.54
Hnf4aP49698 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.68□□□□□ -0.54
Hnf4aP49698 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hnf4aP49698 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms