Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cd9P40240 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.9□□□□□ -0.5
Cd9P40240 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cd9P40240 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd9P40240 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd9P40240 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cd9P40240 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cd9P40240 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cd9P40240 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cd9P40240 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.9□□□□□ -0.51
Cd9P40240 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cd9P40240 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.89□□□□□ -0.51
Cd9P40240 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Gm13296-201ENSMUST00000117854 997 ntBASIC11.89□□□□□ -0.51
Cd9P40240 Gm11660-201ENSMUST00000120955 412 ntBASIC11.89□□□□□ -0.51
Cd9P40240 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Cd9P40240 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cd9P40240 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.89□□□□□ -0.51
Cd9P40240 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd9P40240 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.89□□□□□ -0.51
Cd9P40240 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cd9P40240 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cd9P40240 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cd9P40240 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.88□□□□□ -0.51
Cd9P40240 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cd9P40240 Gm43179-201ENSMUST00000198797 275 ntBASIC11.88□□□□□ -0.51
Cd9P40240 Gm43822-201ENSMUST00000200285 476 ntBASIC11.88□□□□□ -0.51
Cd9P40240 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Cd9P40240 Gm45331-201ENSMUST00000209868 554 ntBASIC11.88□□□□□ -0.51
Cd9P40240 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.88□□□□□ -0.51
Cd9P40240 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.88□□□□□ -0.51
Cd9P40240 Gm5705-201ENSMUST00000066241 711 ntBASIC11.88□□□□□ -0.51
Cd9P40240 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cd9P40240 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.88□□□□□ -0.51
Cd9P40240 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cd9P40240 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.88□□□□□ -0.51
Cd9P40240 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd9P40240 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cd9P40240 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd9P40240 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.87□□□□□ -0.51
Cd9P40240 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.87□□□□□ -0.51
Cd9P40240 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd9P40240 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cd9P40240 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms