Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
Cxcl12P40224 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Cxcl12P40224 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Cxcl12P40224 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.37□□□□□ -0.43
Cxcl12P40224 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.37□□□□□ -0.43
Cxcl12P40224 Gm19587-201ENSMUST00000191395 545 ntBASIC12.37□□□□□ -0.43
Cxcl12P40224 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.37□□□□□ -0.43
Cxcl12P40224 Gm37826-201ENSMUST00000195329 322 ntBASIC12.37□□□□□ -0.43
Cxcl12P40224 Gm29763-201ENSMUST00000205306 616 ntBASIC12.37□□□□□ -0.43
Cxcl12P40224 Gm44882-201ENSMUST00000205702 802 ntBASIC12.37□□□□□ -0.43
Cxcl12P40224 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.37□□□□□ -0.43
Cxcl12P40224 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.37□□□□□ -0.43
Cxcl12P40224 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cxcl12P40224 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Gm23105-201ENSMUST00000083719 134 ntBASIC12.37□□□□□ -0.43
Cxcl12P40224 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.37□□□□□ -0.43
Cxcl12P40224 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Cxcl12P40224 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cxcl12P40224 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.36□□□□□ -0.43
Cxcl12P40224 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.36□□□□□ -0.43
Cxcl12P40224 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.36□□□□□ -0.43
Cxcl12P40224 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.36□□□□□ -0.43
Cxcl12P40224 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cxcl12P40224 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.36□□□□□ -0.43
Cxcl12P40224 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
Cxcl12P40224 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.36□□□□□ -0.43
Cxcl12P40224 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm45113-201ENSMUST00000207518 165 ntBASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.36□□□□□ -0.43
Cxcl12P40224 Gm18968-201ENSMUST00000221319 862 ntBASIC12.36□□□□□ -0.43
Cxcl12P40224 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.36□□□□□ -0.43
Cxcl12P40224 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.36□□□□□ -0.43
Cxcl12P40224 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cxcl12P40224 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cxcl12P40224 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cxcl12P40224 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms