Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.81□□□□□ -0.2
Vcam1P29533 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Vcam1P29533 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vcam1P29533 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vcam1P29533 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.81□□□□□ -0.2
Vcam1P29533 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vcam1P29533 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.81□□□□□ -0.2
Vcam1P29533 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vcam1P29533 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vcam1P29533 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vcam1P29533 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vcam1P29533 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vcam1P29533 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Vcam1P29533 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vcam1P29533 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vcam1P29533 Gm12419-201ENSMUST00000116649 636 ntBASIC13.8□□□□□ -0.2
Vcam1P29533 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.8□□□□□ -0.2
Vcam1P29533 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vcam1P29533 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Gm6485-201ENSMUST00000160676 439 ntBASIC13.8□□□□□ -0.2
Vcam1P29533 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.8□□□□□ -0.2
Vcam1P29533 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.8□□□□□ -0.2
Vcam1P29533 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vcam1P29533 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Vcam1P29533 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vcam1P29533 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vcam1P29533 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.8□□□□□ -0.2
Vcam1P29533 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vcam1P29533 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.79□□□□□ -0.2
Vcam1P29533 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Vcam1P29533 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.79□□□□□ -0.2
Vcam1P29533 Gm25076-201ENSMUST00000104098 132 ntBASIC13.79□□□□□ -0.2
Vcam1P29533 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Vcam1P29533 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.79□□□□□ -0.2
Vcam1P29533 Gm44329-201ENSMUST00000197469 112 ntBASIC13.79□□□□□ -0.2
Vcam1P29533 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vcam1P29533 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms