Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04224 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P04224 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04224 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
P04224 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04224 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.59□□□□□ -0.71
P04224 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
P04224 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P04224 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04224 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
P04224 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.59□□□□□ -0.71
P04224 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04224 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04224 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P04224 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.58□□□□□ -0.71
P04224 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
P04224 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
P04224 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.58□□□□□ -0.72
P04224 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
P04224 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P04224 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.58□□□□□ -0.72
P04224 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.58□□□□□ -0.72
P04224 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
P04224 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Gm12928-201ENSMUST00000117115 573 ntBASIC10.58□□□□□ -0.72
P04224 Gm12859-201ENSMUST00000117834 427 ntBASIC10.58□□□□□ -0.72
P04224 Gm11618-201ENSMUST00000117946 267 ntBASIC10.58□□□□□ -0.72
P04224 Gm14704-201ENSMUST00000120300 874 ntBASIC10.58□□□□□ -0.72
P04224 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.58□□□□□ -0.72
P04224 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P04224 Gm42599-201ENSMUST00000201308 469 ntBASIC10.58□□□□□ -0.72
P04224 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.58□□□□□ -0.72
P04224 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P04224 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P04224 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
P04224 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
P04224 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.58□□□□□ -0.72
P04224 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.58□□□□□ -0.72
P04224 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P04224 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.58□□□□□ -0.72
P04224 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
P04224 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P04224 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.57□□□□□ -0.72
P04224 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
P04224 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.57□□□□□ -0.72
P04224 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.57□□□□□ -0.72
P04224 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.57□□□□□ -0.72
P04224 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.57□□□□□ -0.72
P04224 Gm38671-201ENSMUST00000200573 130 ntBASIC10.57□□□□□ -0.72
P04224 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.57□□□□□ -0.72
P04224 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.57□□□□□ -0.72
P04224 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.57□□□□□ -0.72
P04224 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P04224 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P04224 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
P04224 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04224 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms