Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm10371-202ENSMUST00000228010 1081 ntBASIC8.8□□□□□ -1
TcraP01849 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC8.8□□□□□ -1
TcraP01849 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC8.8□□□□□ -1
TcraP01849 Gm18630-201ENSMUST00000222109 1397 ntBASIC8.8□□□□□ -1
TcraP01849 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
TcraP01849 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC8.8□□□□□ -1
TcraP01849 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
TcraP01849 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
TcraP01849 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
TcraP01849 Gm42427-201ENSMUST00000200473 5292 ntBASIC8.8□□□□□ -1
TcraP01849 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
TcraP01849 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Gm38140-201ENSMUST00000193617 2755 ntBASIC8.79□□□□□ -1
TcraP01849 Gm26660-202ENSMUST00000223620 4112 ntBASIC8.79□□□□□ -1
TcraP01849 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC8.79□□□□□ -1
TcraP01849 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC8.79□□□□□ -1
TcraP01849 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 AC101945.2-201ENSMUST00000227886 1377 ntBASIC8.79□□□□□ -1
TcraP01849 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
TcraP01849 Gm16202-201ENSMUST00000117532 544 ntBASIC8.79□□□□□ -1
TcraP01849 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC8.79□□□□□ -1
TcraP01849 Gm5866-201ENSMUST00000177881 973 ntBASIC8.79□□□□□ -1
TcraP01849 Gm27437-201ENSMUST00000183429 107 ntBASIC8.79□□□□□ -1
TcraP01849 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC8.79□□□□□ -1
TcraP01849 Gm44397-201ENSMUST00000195950 113 ntBASIC8.79□□□□□ -1
TcraP01849 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Gm6983-201ENSMUST00000214912 628 ntBASIC8.79□□□□□ -1
TcraP01849 AC156560.2-201ENSMUST00000221232 264 ntBASIC8.79□□□□□ -1
TcraP01849 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
TcraP01849 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC8.79□□□□□ -1
TcraP01849 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Gm16372-201ENSMUST00000073088 450 ntBASIC8.79□□□□□ -1
TcraP01849 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
TcraP01849 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC8.79□□□□□ -1
TcraP01849 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
TcraP01849 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
TcraP01849 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Retreg1-206ENSMUST00000228306 1430 ntBASIC8.79□□□□□ -1
TcraP01849 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TcraP01849 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
TcraP01849 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
TcraP01849 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
TcraP01849 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
TcraP01849 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
TcraP01849 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
TcraP01849 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC8.78□□□□□ -1
TcraP01849 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
TcraP01849 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC8.78□□□□□ -1
TcraP01849 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TcraP01849 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms