Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Setdb1O88974 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Setdb1O88974 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.75□□□□□ -0.05
Setdb1O88974 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Gm7722-201ENSMUST00000120646 741 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 Gm13182-201ENSMUST00000122241 312 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Gm22442-201ENSMUST00000157256 144 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.75□□□□□ -0.05
Setdb1O88974 Gm42657-201ENSMUST00000201746 211 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Gm45120-201ENSMUST00000208880 408 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Setdb1O88974 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Gm9519-201ENSMUST00000206108 1337 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 Gm7278-201ENSMUST00000119836 1401 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Setdb1O88974 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.75□□□□□ -0.05
Setdb1O88974 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Setdb1O88974 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Setdb1O88974 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.75□□□□□ -0.05
Setdb1O88974 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.74□□□□□ -0.05
Setdb1O88974 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Gm23912-201ENSMUST00000104687 87 ntBASIC14.74□□□□□ -0.05
Setdb1O88974 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.74□□□□□ -0.05
Setdb1O88974 Gm43184-201ENSMUST00000197247 542 ntBASIC14.74□□□□□ -0.05
Setdb1O88974 Gm43778-201ENSMUST00000199438 199 ntBASIC14.74□□□□□ -0.05
Setdb1O88974 Gm44158-201ENSMUST00000203881 505 ntBASIC14.74□□□□□ -0.05
Setdb1O88974 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.74□□□□□ -0.05
Setdb1O88974 Gm4157-201ENSMUST00000211647 679 ntBASIC14.74□□□□□ -0.05
Setdb1O88974 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.74□□□□□ -0.05
Setdb1O88974 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.74□□□□□ -0.05
Setdb1O88974 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
Setdb1O88974 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
Setdb1O88974 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Setdb1O88974 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.74□□□□□ -0.05
Setdb1O88974 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Setdb1O88974 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Setdb1O88974 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.73□□□□□ -0.05
Setdb1O88974 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Setdb1O88974 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Setdb1O88974 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Setdb1O88974 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Setdb1O88974 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Setdb1O88974 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Setdb1O88974 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Setdb1O88974 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms