Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.28□□□□□ -0.92
Gm10226O88253 Gm7851-201ENSMUST00000117574 323 ntBASIC9.28□□□□□ -0.92
Gm10226O88253 B9d1os-201ENSMUST00000137010 674 ntBASIC9.28□□□□□ -0.92
Gm10226O88253 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.28□□□□□ -0.92
Gm10226O88253 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.28□□□□□ -0.92
Gm10226O88253 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Gm10288-201ENSMUST00000084614 537 ntBASIC9.28□□□□□ -0.92
Gm10226O88253 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
Gm10226O88253 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Gm42748-201ENSMUST00000199354 2341 ntBASIC9.28□□□□□ -0.92
Gm10226O88253 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.28□□□□□ -0.92
Gm10226O88253 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Kcnk16-202ENSMUST00000225596 2127 ntBASIC9.28□□□□□ -0.92
Gm10226O88253 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Gm10226O88253 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm10226O88253 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10226O88253 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.27□□□□□ -0.92
Gm10226O88253 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10226O88253 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10226O88253 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.27□□□□□ -0.92
Gm10226O88253 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10226O88253 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Gm10226O88253 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10226O88253 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10226O88253 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm10226O88253 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Gm10226O88253 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Gm10226O88253 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Gm10226O88253 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Gm10226O88253 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.27□□□□□ -0.93
Gm10226O88253 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Gm10226O88253 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Gm10226O88253 Gm4310-201ENSMUST00000177847 889 ntBASIC9.27□□□□□ -0.93
Gm10226O88253 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Gm10226O88253 Mir6979-201ENSMUST00000183927 56 ntBASIC9.27□□□□□ -0.93
Gm10226O88253 Gm27530-201ENSMUST00000184096 98 ntBASIC9.27□□□□□ -0.93
Gm10226O88253 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.27□□□□□ -0.93
Gm10226O88253 Gm5733-201ENSMUST00000190232 939 ntBASIC9.27□□□□□ -0.93
Gm10226O88253 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.27□□□□□ -0.93
Gm10226O88253 Gm18753-201ENSMUST00000201000 566 ntBASIC9.27□□□□□ -0.93
Gm10226O88253 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.27□□□□□ -0.93
Gm10226O88253 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.27□□□□□ -0.93
Gm10226O88253 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Gm10226O88253 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.27□□□□□ -0.93
Gm10226O88253 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Gm10226O88253 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm10226O88253 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC9.26□□□□□ -0.93
Gm10226O88253 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms