Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Trdmt1O55055 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.27□□□□□ -0.29
Trdmt1O55055 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.27□□□□□ -0.29
Trdmt1O55055 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdmt1O55055 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.26□□□□□ -0.29
Trdmt1O55055 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.26□□□□□ -0.29
Trdmt1O55055 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Gm7593-201ENSMUST00000187246 644 ntBASIC13.26□□□□□ -0.29
Trdmt1O55055 Gm37028-201ENSMUST00000194276 107 ntBASIC13.26□□□□□ -0.29
Trdmt1O55055 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.26□□□□□ -0.29
Trdmt1O55055 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.26□□□□□ -0.29
Trdmt1O55055 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.26□□□□□ -0.29
Trdmt1O55055 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.26□□□□□ -0.29
Trdmt1O55055 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trdmt1O55055 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Trdmt1O55055 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.25□□□□□ -0.29
Trdmt1O55055 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Gm38151-201ENSMUST00000195085 289 ntBASIC13.25□□□□□ -0.29
Trdmt1O55055 Gm6450-201ENSMUST00000200896 574 ntBASIC13.25□□□□□ -0.29
Trdmt1O55055 Gm6108-201ENSMUST00000208365 367 ntBASIC13.25□□□□□ -0.29
Trdmt1O55055 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trdmt1O55055 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.25□□□□□ -0.29
Trdmt1O55055 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.25□□□□□ -0.29
Trdmt1O55055 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.25□□□□□ -0.29
Trdmt1O55055 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trdmt1O55055 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms