Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Polr1aO35134 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Polr1aO35134 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Polr1aO35134 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Polr1aO35134 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Polr1aO35134 Gm24791-201ENSMUST00000104284 131 ntBASIC18.2■□□□□ 0.5
Polr1aO35134 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Polr1aO35134 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Gm38314-201ENSMUST00000195709 625 ntBASIC18.2■□□□□ 0.5
Polr1aO35134 AC134248.1-201ENSMUST00000216113 1176 ntBASIC18.2■□□□□ 0.5
Polr1aO35134 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Polr1aO35134 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Polr1aO35134 Gm44758-201ENSMUST00000206096 2068 ntBASIC18.2■□□□□ 0.5
Polr1aO35134 Gm18798-201ENSMUST00000187264 1700 ntBASIC18.2■□□□□ 0.5
Polr1aO35134 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC18.2■□□□□ 0.5
Polr1aO35134 Gm15003-201ENSMUST00000118884 446 ntBASIC18.2■□□□□ 0.5
Polr1aO35134 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr1aO35134 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC18.2■□□□□ 0.5
Polr1aO35134 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC18.2■□□□□ 0.5
Polr1aO35134 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Polr1aO35134 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Polr1aO35134 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC18.19■□□□□ 0.5
Polr1aO35134 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC18.19■□□□□ 0.5
Polr1aO35134 Gm14274-201ENSMUST00000117182 615 ntBASIC18.19■□□□□ 0.5
Polr1aO35134 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC18.19■□□□□ 0.5
Polr1aO35134 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Polr1aO35134 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Polr1aO35134 Gm43242-201ENSMUST00000199507 1776 ntBASIC18.19■□□□□ 0.5
Polr1aO35134 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC18.19■□□□□ 0.5
Polr1aO35134 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC18.19■□□□□ 0.5
Polr1aO35134 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr1aO35134 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Polr1aO35134 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Gm5641-201ENSMUST00000091130 1488 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC18.18■□□□□ 0.5
Polr1aO35134 Gm11560-201ENSMUST00000117567 948 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Gm14740-201ENSMUST00000118538 1150 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
Polr1aO35134 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Polr1aO35134 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Polr1aO35134 Gm26989-201ENSMUST00000182608 749 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC18.18■□□□□ 0.5
Polr1aO35134 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC18.18■□□□□ 0.5
Polr1aO35134 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC18.18■□□□□ 0.5
Polr1aO35134 AC130477.1-201ENSMUST00000226982 420 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Polr1aO35134 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC18.18■□□□□ 0.5
Polr1aO35134 Gm44292-201ENSMUST00000205194 2364 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Gm15036-201ENSMUST00000118880 400 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Gm13445-201ENSMUST00000121664 307 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Gm37638-201ENSMUST00000194337 1123 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Gm42655-201ENSMUST00000202782 1134 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Gm45500-201ENSMUST00000211676 803 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Gm45856-201ENSMUST00000212752 416 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Gm6390-201ENSMUST00000215034 589 ntBASIC18.18■□□□□ 0.5
Polr1aO35134 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr1aO35134 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Polr1aO35134 Gm44831-201ENSMUST00000208469 2989 ntBASIC18.17■□□□□ 0.5
Polr1aO35134 AC165351.1-201ENSMUST00000219078 2020 ntBASIC18.17■□□□□ 0.5
Polr1aO35134 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms