Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc188F6WEU2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc188F6WEU2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc188F6WEU2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccdc188F6WEU2 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.13□□□□□ -0.47
Ccdc188F6WEU2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc188F6WEU2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc188F6WEU2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc188F6WEU2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc188F6WEU2 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Gm14247-201ENSMUST00000120950 237 ntBASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Gm25569-201ENSMUST00000157175 131 ntBASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Gm7504-201ENSMUST00000201449 424 ntBASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc188F6WEU2 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gm25394-201ENSMUST00000157338 133 ntBASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gm26174-201ENSMUST00000158415 219 ntBASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Mir6359-201ENSMUST00000183668 81 ntBASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 AC154213.1-201ENSMUST00000228234 583 ntBASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc188F6WEU2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms