Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.27□□□□□ -0.45
Ccdc149F6V035 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc149F6V035 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Gm13809-201ENSMUST00000117921 597 ntBASIC12.26□□□□□ -0.45
Ccdc149F6V035 Gm13461-201ENSMUST00000120980 662 ntBASIC12.26□□□□□ -0.45
Ccdc149F6V035 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Gm18893-201ENSMUST00000198416 943 ntBASIC12.26□□□□□ -0.45
Ccdc149F6V035 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.26□□□□□ -0.45
Ccdc149F6V035 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.26□□□□□ -0.45
Ccdc149F6V035 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.26□□□□□ -0.45
Ccdc149F6V035 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.26□□□□□ -0.45
Ccdc149F6V035 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.26□□□□□ -0.45
Ccdc149F6V035 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.26□□□□□ -0.45
Ccdc149F6V035 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ccdc149F6V035 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.25□□□□□ -0.45
Ccdc149F6V035 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.25□□□□□ -0.45
Ccdc149F6V035 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.25□□□□□ -0.45
Ccdc149F6V035 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Gm8199-201ENSMUST00000121323 823 ntBASIC12.25□□□□□ -0.45
Ccdc149F6V035 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc149F6V035 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Gm7467-201ENSMUST00000185173 652 ntBASIC12.25□□□□□ -0.45
Ccdc149F6V035 Gm10774-201ENSMUST00000188689 204 ntBASIC12.25□□□□□ -0.45
Ccdc149F6V035 Gm2553-201ENSMUST00000215986 605 ntBASIC12.25□□□□□ -0.45
Ccdc149F6V035 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms