Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Cts7-204ENSMUST00000225321 1257 ntBASIC12.56□□□□□ -0.4
Cpne8Q9DC53 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.55□□□□□ -0.4
Cpne8Q9DC53 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm5419-201ENSMUST00000119301 527 ntBASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm18893-201ENSMUST00000198416 943 ntBASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm7399-201ENSMUST00000032395 858 ntBASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne8Q9DC53 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.54□□□□□ -0.4
Cpne8Q9DC53 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne8Q9DC53 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms