Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Gm6180-201ENSMUST00000065243 498 ntBASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Gm14999-201ENSMUST00000121039 624 ntBASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Gm8738-201ENSMUST00000172606 329 ntBASIC11.96□□□□□ -0.49
Ssu72Q9CY97 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Gm27682-201ENSMUST00000183930 110 ntBASIC11.96□□□□□ -0.49
Ssu72Q9CY97 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Gm28196-201ENSMUST00000187719 640 ntBASIC11.96□□□□□ -0.49
Ssu72Q9CY97 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ssu72Q9CY97 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.96□□□□□ -0.5
Ssu72Q9CY97 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ssu72Q9CY97 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Gm12058-201ENSMUST00000118614 437 ntBASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.95□□□□□ -0.5
Ssu72Q9CY97 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ssu72Q9CY97 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms