Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm44651-201ENSMUST00000207343 372 ntBASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 Gm13097-201ENSMUST00000210722 397 ntBASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rpa3Q9CQ71 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Gm25668-201ENSMUST00000157700 129 ntBASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa3Q9CQ71 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa3Q9CQ71 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.77□□□□□ -0.36
Rpa3Q9CQ71 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa3Q9CQ71 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Rpa3Q9CQ71 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa3Q9CQ71 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rpa3Q9CQ71 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Gm38317-201ENSMUST00000195564 343 ntBASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Rprl1-202ENSMUST00000198476 238 ntBASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Gm45598-202ENSMUST00000210719 986 ntBASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa3Q9CQ71 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa3Q9CQ71 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa3Q9CQ71 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms