Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Gm6963-201ENSMUST00000147879 379 ntBASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tlr3Q99MB1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm14028-201ENSMUST00000117434 479 ntBASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm4909-201ENSMUST00000118749 794 ntBASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm12036-201ENSMUST00000120008 530 ntBASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.97□□□□□ -0.33
Tlr3Q99MB1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms