Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm13736-201ENSMUST00000119272 253 ntBASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm14999-201ENSMUST00000121039 624 ntBASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm14760-201ENSMUST00000121831 999 ntBASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm2546-201ENSMUST00000182630 991 ntBASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm29396-201ENSMUST00000185659 716 ntBASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm43179-201ENSMUST00000198797 275 ntBASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chmp1b1Q99LU0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm11793-201ENSMUST00000120433 981 ntBASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm13342-201ENSMUST00000121055 207 ntBASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm13316-201ENSMUST00000140537 691 ntBASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm3961-201ENSMUST00000204425 994 ntBASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm9368-201ENSMUST00000219348 831 ntBASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.44□□□□□ -0.58
Chmp1b1Q99LU0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chmp1b1Q99LU0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms