Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm8510-201ENSMUST00000189202 895 ntBASIC12.74□□□□□ -0.37
Clp1Q99LI9 Gm2316-201ENSMUST00000190613 921 ntBASIC12.74□□□□□ -0.37
Clp1Q99LI9 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.74□□□□□ -0.37
Clp1Q99LI9 Gm5100-201ENSMUST00000195631 589 ntBASIC12.74□□□□□ -0.37
Clp1Q99LI9 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Clp1Q99LI9 CT010431.1-201ENSMUST00000221249 1080 ntBASIC12.74□□□□□ -0.37
Clp1Q99LI9 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clp1Q99LI9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.73□□□□□ -0.37
Clp1Q99LI9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Gm13600-201ENSMUST00000117949 744 ntBASIC12.73□□□□□ -0.37
Clp1Q99LI9 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Gm4034-201ENSMUST00000187674 480 ntBASIC12.73□□□□□ -0.37
Clp1Q99LI9 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.73□□□□□ -0.37
Clp1Q99LI9 Gm45594-201ENSMUST00000211717 241 ntBASIC12.73□□□□□ -0.37
Clp1Q99LI9 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.73□□□□□ -0.37
Clp1Q99LI9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clp1Q99LI9 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.73□□□□□ -0.37
Clp1Q99LI9 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.73□□□□□ -0.37
Clp1Q99LI9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.72□□□□□ -0.37
Clp1Q99LI9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm12419-201ENSMUST00000116649 636 ntBASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm14219-201ENSMUST00000120414 288 ntBASIC12.72□□□□□ -0.37
Clp1Q99LI9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm22877-201ENSMUST00000175451 105 ntBASIC12.72□□□□□ -0.37
Clp1Q99LI9 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.72□□□□□ -0.37
Clp1Q99LI9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm3619-201ENSMUST00000219947 775 ntBASIC12.72□□□□□ -0.37
Clp1Q99LI9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.72□□□□□ -0.37
Clp1Q99LI9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clp1Q99LI9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms