Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm22711-201ENSMUST00000116890 133 ntBASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm11836-201ENSMUST00000121022 441 ntBASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm43520-201ENSMUST00000197996 164 ntBASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Smarcd2Q99JR8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gm13182-201ENSMUST00000122241 312 ntBASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gm42518-201ENSMUST00000196277 938 ntBASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gm44506-201ENSMUST00000206278 965 ntBASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gm17931-201ENSMUST00000208132 634 ntBASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd2Q99JR8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms