Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp3Q91W36 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Usp3Q91W36 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp3Q91W36 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp3Q91W36 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp3Q91W36 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp3Q91W36 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp3Q91W36 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Usp3Q91W36 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Usp3Q91W36 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp3Q91W36 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp3Q91W36 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp3Q91W36 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp3Q91W36 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp3Q91W36 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp3Q91W36 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.56□□□□□ -0.4
Usp3Q91W36 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm24749-201ENSMUST00000157838 343 ntBASIC12.56□□□□□ -0.4
Usp3Q91W36 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.56□□□□□ -0.4
Usp3Q91W36 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 AC132384.6-201ENSMUST00000218976 1206 ntBASIC12.56□□□□□ -0.4
Usp3Q91W36 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp3Q91W36 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.56□□□□□ -0.4
Usp3Q91W36 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp3Q91W36 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Usp3Q91W36 Matn2-203ENSMUST00000226766 3252 ntBASIC12.56□□□□□ -0.4
Usp3Q91W36 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp3Q91W36 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Usp3Q91W36 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Usp3Q91W36 Gm14028-201ENSMUST00000117434 479 ntBASIC12.55□□□□□ -0.4
Usp3Q91W36 Gm7722-201ENSMUST00000120646 741 ntBASIC12.55□□□□□ -0.4
Usp3Q91W36 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp3Q91W36 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp3Q91W36 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp3Q91W36 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp3Q91W36 AY036118-201ENSMUST00000200021 923 ntBASIC12.55□□□□□ -0.4
Usp3Q91W36 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp3Q91W36 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp3Q91W36 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp3Q91W36 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms