Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc9Q8VC31 Gm13126-201ENSMUST00000117079 3063 ntBASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc9Q8VC31 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Gm13813-201ENSMUST00000120998 787 ntBASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Mir7684-201ENSMUST00000183858 60 ntBASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc9Q8VC31 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc9Q8VC31 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms