Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Gm8913-201ENSMUST00000209491 641 ntBASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3a1Q8K4Z5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Sf3a1Q8K4Z5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Gm45186-201ENSMUST00000206874 478 ntBASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3a1Q8K4Z5 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a1Q8K4Z5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms