Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm26185-201ENSMUST00000157692 266 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco3Q8BQM7 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Gm22189-201ENSMUST00000103822 86 ntBASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Gm8805-201ENSMUST00000117848 313 ntBASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Gm15321-201ENSMUST00000121290 288 ntBASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Rmrp-201ENSMUST00000157463 271 ntBASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Gm17208-201ENSMUST00000168388 535 ntBASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Gm10576-201ENSMUST00000191927 825 ntBASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Gm18473-201ENSMUST00000220543 868 ntBASIC9.92□□□□□ -0.82
Smco3Q8BQM7 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco3Q8BQM7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms