Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Gm23119-201ENSMUST00000158610 140 ntBASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Gm18304-201ENSMUST00000189162 546 ntBASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Gm22018-201ENSMUST00000104357 131 ntBASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Gm43133-201ENSMUST00000197472 463 ntBASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc40Q8BI79 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gm5187-201ENSMUST00000117317 991 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gm12058-201ENSMUST00000118614 437 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gm37424-201ENSMUST00000191727 561 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gm37201-201ENSMUST00000191845 523 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gm38002-201ENSMUST00000193255 180 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gm44958-201ENSMUST00000203734 736 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 Gm44882-201ENSMUST00000205702 802 ntBASIC12.66□□□□□ -0.38
Ccdc40Q8BI79 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms