Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.22■□□□□ 0.03
Slit1Q80TR4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Slit1Q80TR4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.21■□□□□ 0.03
Slit1Q80TR4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Gm21778-201ENSMUST00000178779 471 ntBASIC15.21■□□□□ 0.03
Slit1Q80TR4 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Mir6923-201ENSMUST00000184592 72 ntBASIC15.21■□□□□ 0.03
Slit1Q80TR4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Gm7902-201ENSMUST00000198842 947 ntBASIC15.21■□□□□ 0.03
Slit1Q80TR4 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 AC153152.3-201ENSMUST00000222188 1135 ntBASIC15.21■□□□□ 0.03
Slit1Q80TR4 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slit1Q80TR4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slit1Q80TR4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slit1Q80TR4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Slit1Q80TR4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Slit1Q80TR4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Slit1Q80TR4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Gm12179-201ENSMUST00000118344 1272 ntBASIC15.2■□□□□ 0.02
Slit1Q80TR4 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Gm28833-201ENSMUST00000189671 559 ntBASIC15.2■□□□□ 0.02
Slit1Q80TR4 Gm37638-201ENSMUST00000194337 1123 ntBASIC15.2■□□□□ 0.02
Slit1Q80TR4 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Gm5996-201ENSMUST00000211110 718 ntBASIC15.2■□□□□ 0.02
Slit1Q80TR4 Mt1-202ENSMUST00000211807 1085 ntBASIC15.2■□□□□ 0.02
Slit1Q80TR4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slit1Q80TR4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC15.2■□□□□ 0.02
Slit1Q80TR4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.19■□□□□ 0.02
Slit1Q80TR4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Gm3433-201ENSMUST00000210149 1058 ntBASIC15.19■□□□□ 0.02
Slit1Q80TR4 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Gm19046-201ENSMUST00000221263 1298 ntBASIC15.19■□□□□ 0.02
Slit1Q80TR4 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC15.19■□□□□ 0.02
Slit1Q80TR4 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Gm5641-201ENSMUST00000091130 1488 ntBASIC15.19■□□□□ 0.02
Slit1Q80TR4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slit1Q80TR4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms