Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Gm20495-201ENSMUST00000173902 235 ntBASIC13.95□□□□□ -0.18
Scn9aQ62205 Trav11n-201ENSMUST00000200113 343 ntBASIC13.95□□□□□ -0.18
Scn9aQ62205 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.95□□□□□ -0.18
Scn9aQ62205 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.94□□□□□ -0.18
Scn9aQ62205 Mir1905-201ENSMUST00000122779 82 ntBASIC13.94□□□□□ -0.18
Scn9aQ62205 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Scn9aQ62205 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.94□□□□□ -0.18
Scn9aQ62205 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Gm6423-201ENSMUST00000204315 934 ntBASIC13.94□□□□□ -0.18
Scn9aQ62205 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Scn9aQ62205 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Scn9aQ62205 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Scn9aQ62205 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.94□□□□□ -0.18
Scn9aQ62205 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Scn9aQ62205 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.94□□□□□ -0.18
Scn9aQ62205 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn9aQ62205 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.94□□□□□ -0.18
Scn9aQ62205 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.94□□□□□ -0.18
Scn9aQ62205 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC13.94□□□□□ -0.18
Scn9aQ62205 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.94□□□□□ -0.18
Scn9aQ62205 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn9aQ62205 Gm17825-201ENSMUST00000206836 794 ntBASIC13.94□□□□□ -0.18
Scn9aQ62205 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn9aQ62205 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scn9aQ62205 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn9aQ62205 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn9aQ62205 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scn9aQ62205 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn9aQ62205 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Scn9aQ62205 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn9aQ62205 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC13.93□□□□□ -0.18
Scn9aQ62205 Gm11957-201ENSMUST00000118304 779 ntBASIC13.93□□□□□ -0.18
Scn9aQ62205 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Scn9aQ62205 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn9aQ62205 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Scn9aQ62205 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Scn9aQ62205 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Scn9aQ62205 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn9aQ62205 Gm5982-201ENSMUST00000196234 512 ntBASIC13.93□□□□□ -0.18
Scn9aQ62205 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC13.93□□□□□ -0.18
Scn9aQ62205 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.93□□□□□ -0.18
Scn9aQ62205 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn9aQ62205 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn9aQ62205 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms