Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm4482-201ENSMUST00000200876 742 ntBASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm45118-201ENSMUST00000208928 825 ntBASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.86□□□□□ -0.35
Shroom1Q5SX79 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shroom1Q5SX79 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm14058-201ENSMUST00000116082 735 ntBASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm12196-201ENSMUST00000120954 262 ntBASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm9555-201ENSMUST00000200908 583 ntBASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.85□□□□□ -0.35
Shroom1Q5SX79 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms