Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Gm22711-201ENSMUST00000116890 133 ntBASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Gm34023-201ENSMUST00000195539 217 ntBASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Upf3aQ3ULJ3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Upf3aQ3ULJ3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upf3aQ3ULJ3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Upf3aQ3ULJ3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm11451-201ENSMUST00000118946 630 ntBASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm16071-201ENSMUST00000119589 793 ntBASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm15610-201ENSMUST00000120584 195 ntBASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm17826-201ENSMUST00000189720 798 ntBASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm37905-201ENSMUST00000195310 341 ntBASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm2553-201ENSMUST00000215986 605 ntBASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upf3aQ3ULJ3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm12899-201ENSMUST00000120565 551 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm23153-201ENSMUST00000175323 313 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm21092-201ENSMUST00000178995 955 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm10731-201ENSMUST00000181171 448 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm4654-201ENSMUST00000183305 982 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm38117-201ENSMUST00000194653 939 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm43520-201ENSMUST00000197996 164 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upf3aQ3ULJ3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms