Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Gm12241-201ENSMUST00000118330 726 ntBASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Gm30285-201ENSMUST00000214614 422 ntBASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.38□□□□□ -0.59
Brf2Q3UAW9 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Brf2Q3UAW9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm11222-201ENSMUST00000119005 738 ntBASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Brf2Q3UAW9 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms