Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC9.98□□□□□ -0.81
Usp9xP70398 Gm16167-201ENSMUST00000160428 1065 ntBASIC9.98□□□□□ -0.81
Usp9xP70398 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp9xP70398 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.98□□□□□ -0.81
Usp9xP70398 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.98□□□□□ -0.81
Usp9xP70398 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usp9xP70398 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Usp9xP70398 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Usp9xP70398 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp9xP70398 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp9xP70398 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp9xP70398 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp9xP70398 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Usp9xP70398 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp9xP70398 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 AC164107.1-201ENSMUST00000227730 2161 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.97□□□□□ -0.81
Usp9xP70398 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC9.97□□□□□ -0.81
Usp9xP70398 Gm11660-201ENSMUST00000120955 412 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 Gm12453-201ENSMUST00000121981 331 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
Usp9xP70398 Gm43854-201ENSMUST00000200418 394 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 Gm45094-201ENSMUST00000207013 617 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 Gm45085-201ENSMUST00000209100 441 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.97□□□□□ -0.81
Usp9xP70398 AC134537.1-201ENSMUST00000219205 265 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 Gm4930-201ENSMUST00000219926 1087 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Usp9xP70398 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Usp9xP70398 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Usp9xP70398 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC9.97□□□□□ -0.81
Usp9xP70398 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Usp9xP70398 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC9.97□□□□□ -0.81
Usp9xP70398 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Usp9xP70398 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.97□□□□□ -0.81
Usp9xP70398 Mir1905-201ENSMUST00000122779 82 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.97□□□□□ -0.81
Usp9xP70398 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.97□□□□□ -0.81
Usp9xP70398 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Gm6108-201ENSMUST00000208365 367 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Usp9xP70398 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Usp9xP70398 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Gm37795-201ENSMUST00000194216 2459 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Gm42769-201ENSMUST00000198576 1659 ntBASIC9.97□□□□□ -0.81
Usp9xP70398 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp9xP70398 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp9xP70398 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp9xP70398 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp9xP70398 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp9xP70398 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Usp9xP70398 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp9xP70398 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp9xP70398 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.96□□□□□ -0.81
Usp9xP70398 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp9xP70398 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Usp9xP70398 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Usp9xP70398 Gm12337-201ENSMUST00000119634 400 ntBASIC9.96□□□□□ -0.81
Usp9xP70398 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.96□□□□□ -0.81
Usp9xP70398 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Usp9xP70398 Gm3329-201ENSMUST00000159873 556 ntBASIC9.96□□□□□ -0.81
Usp9xP70398 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Usp9xP70398 Gm9136-201ENSMUST00000193368 454 ntBASIC9.96□□□□□ -0.81
Usp9xP70398 Gm44315-201ENSMUST00000203041 219 ntBASIC9.96□□□□□ -0.81
Usp9xP70398 Gm8342-201ENSMUST00000209839 757 ntBASIC9.96□□□□□ -0.81
Usp9xP70398 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC9.96□□□□□ -0.81
Usp9xP70398 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms