Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup43P59235 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.41□□□□□ -0.58
Nup43P59235 Gm4857-201ENSMUST00000192718 785 ntBASIC11.41□□□□□ -0.58
Nup43P59235 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.41□□□□□ -0.58
Nup43P59235 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.41□□□□□ -0.58
Nup43P59235 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nup43P59235 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.41□□□□□ -0.58
Nup43P59235 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.41□□□□□ -0.58
Nup43P59235 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.41□□□□□ -0.58
Nup43P59235 Gm9257-201ENSMUST00000221254 232 ntBASIC11.41□□□□□ -0.58
Nup43P59235 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup43P59235 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup43P59235 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup43P59235 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nup43P59235 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nup43P59235 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nup43P59235 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nup43P59235 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Nup43P59235 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nup43P59235 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.41□□□□□ -0.58
Nup43P59235 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nup43P59235 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nup43P59235 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Nup43P59235 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.4□□□□□ -0.58
Nup43P59235 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Nup43P59235 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.4□□□□□ -0.58
Nup43P59235 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.4□□□□□ -0.58
Nup43P59235 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.4□□□□□ -0.58
Nup43P59235 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Nup43P59235 Gm15610-201ENSMUST00000120584 195 ntBASIC11.4□□□□□ -0.58
Nup43P59235 Gm12164-201ENSMUST00000121695 551 ntBASIC11.4□□□□□ -0.58
Nup43P59235 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.4□□□□□ -0.58
Nup43P59235 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.4□□□□□ -0.58
Nup43P59235 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Gm44262-201ENSMUST00000204969 372 ntBASIC11.4□□□□□ -0.58
Nup43P59235 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.4□□□□□ -0.58
Nup43P59235 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.4□□□□□ -0.58
Nup43P59235 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.4□□□□□ -0.58
Nup43P59235 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.4□□□□□ -0.58
Nup43P59235 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Nup43P59235 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nup43P59235 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Nup43P59235 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup43P59235 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup43P59235 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Nup43P59235 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup43P59235 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.4□□□□□ -0.59
Nup43P59235 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.4□□□□□ -0.59
Nup43P59235 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup43P59235 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Nup43P59235 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Nup43P59235 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.59
Nup43P59235 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup43P59235 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nup43P59235 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.39□□□□□ -0.59
Nup43P59235 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.39□□□□□ -0.59
Nup43P59235 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Nup43P59235 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Nup43P59235 Gm13996-201ENSMUST00000118456 430 ntBASIC11.39□□□□□ -0.59
Nup43P59235 Gm15808-201ENSMUST00000119046 604 ntBASIC11.39□□□□□ -0.59
Nup43P59235 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.39□□□□□ -0.59
Nup43P59235 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms