Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lim2P56563 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lim2P56563 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Gm13996-201ENSMUST00000118456 430 ntBASIC12.08□□□□□ -0.48
Lim2P56563 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Lim2P56563 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.08□□□□□ -0.48
Lim2P56563 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lim2P56563 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.08□□□□□ -0.48
Lim2P56563 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Lim2P56563 Gm45186-201ENSMUST00000206874 478 ntBASIC12.08□□□□□ -0.48
Lim2P56563 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.08□□□□□ -0.48
Lim2P56563 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lim2P56563 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Lim2P56563 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lim2P56563 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lim2P56563 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.08□□□□□ -0.48
Lim2P56563 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.07□□□□□ -0.48
Lim2P56563 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.07□□□□□ -0.48
Lim2P56563 Gm29199-201ENSMUST00000187766 775 ntBASIC12.07□□□□□ -0.48
Lim2P56563 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.07□□□□□ -0.48
Lim2P56563 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.07□□□□□ -0.48
Lim2P56563 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lim2P56563 Gm18711-201ENSMUST00000199341 750 ntBASIC12.07□□□□□ -0.48
Lim2P56563 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.07□□□□□ -0.48
Lim2P56563 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Gm8913-201ENSMUST00000209491 641 ntBASIC12.07□□□□□ -0.48
Lim2P56563 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.07□□□□□ -0.48
Lim2P56563 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.07□□□□□ -0.48
Lim2P56563 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.07□□□□□ -0.48
Lim2P56563 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Lim2P56563 Cog3-203ENSMUST00000227473 4197 ntBASIC12.07□□□□□ -0.48
Lim2P56563 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.07□□□□□ -0.48
Lim2P56563 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lim2P56563 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.07□□□□□ -0.48
Lim2P56563 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lim2P56563 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.06□□□□□ -0.48
Lim2P56563 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lim2P56563 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lim2P56563 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 Gm14017-201ENSMUST00000121934 386 ntBASIC12.06□□□□□ -0.48
Lim2P56563 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.06□□□□□ -0.48
Lim2P56563 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.06□□□□□ -0.48
Lim2P56563 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lim2P56563 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms