Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Atxn1P54254 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Atxn1P54254 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.04□□□□□ -0.48
Atxn1P54254 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Atxn1P54254 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Gm22133-201ENSMUST00000102082 109 ntBASIC12.04□□□□□ -0.48
Atxn1P54254 Gm13182-201ENSMUST00000122241 312 ntBASIC12.04□□□□□ -0.48
Atxn1P54254 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.04□□□□□ -0.48
Atxn1P54254 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.04□□□□□ -0.48
Atxn1P54254 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.04□□□□□ -0.48
Atxn1P54254 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Mir6923-201ENSMUST00000184592 72 ntBASIC12.04□□□□□ -0.48
Atxn1P54254 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.04□□□□□ -0.48
Atxn1P54254 Gm42518-201ENSMUST00000196277 938 ntBASIC12.04□□□□□ -0.48
Atxn1P54254 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Atxn1P54254 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.04□□□□□ -0.48
Atxn1P54254 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.04□□□□□ -0.48
Atxn1P54254 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.04□□□□□ -0.48
Atxn1P54254 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atxn1P54254 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.04□□□□□ -0.48
Atxn1P54254 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Atxn1P54254 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.03□□□□□ -0.48
Atxn1P54254 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Atxn1P54254 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm24891-201ENSMUST00000104391 136 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Atxn1P54254 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.03□□□□□ -0.48
Atxn1P54254 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.03□□□□□ -0.48
Atxn1P54254 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.03□□□□□ -0.48
Atxn1P54254 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.03□□□□□ -0.48
Atxn1P54254 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Mir483-201ENSMUST00000093631 73 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.03□□□□□ -0.48
Atxn1P54254 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atxn1P54254 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms