Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ercc3P49135 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ercc3P49135 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Map1b-203ENSMUST00000223725 2669 ntBASIC14.35□□□□□ -0.11
Ercc3P49135 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ercc3P49135 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Gm9230-201ENSMUST00000188228 532 ntBASIC14.35□□□□□ -0.11
Ercc3P49135 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.35□□□□□ -0.11
Ercc3P49135 Gm32999-201ENSMUST00000192693 562 ntBASIC14.35□□□□□ -0.11
Ercc3P49135 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.35□□□□□ -0.11
Ercc3P49135 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.35□□□□□ -0.11
Ercc3P49135 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ercc3P49135 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.35□□□□□ -0.11
Ercc3P49135 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ercc3P49135 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ercc3P49135 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ercc3P49135 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.34□□□□□ -0.11
Ercc3P49135 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Gm14130-201ENSMUST00000118417 987 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Ercc3P49135 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.34□□□□□ -0.11
Ercc3P49135 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Gm24749-201ENSMUST00000157838 343 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Gm27341-201ENSMUST00000183570 106 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Gm2260-201ENSMUST00000184965 657 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Gm19187-201ENSMUST00000206781 892 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.34□□□□□ -0.11
Ercc3P49135 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.34□□□□□ -0.11
Ercc3P49135 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Mir433-201ENSMUST00000093564 124 ntBASIC14.34□□□□□ -0.11
Ercc3P49135 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ercc3P49135 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.34□□□□□ -0.11
Ercc3P49135 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ercc3P49135 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc3P49135 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc3P49135 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc3P49135 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ercc3P49135 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ercc3P49135 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.33□□□□□ -0.12
Ercc3P49135 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ercc3P49135 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.33□□□□□ -0.12
Ercc3P49135 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Gm18827-201ENSMUST00000188341 790 ntBASIC14.33□□□□□ -0.12
Ercc3P49135 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.33□□□□□ -0.12
Ercc3P49135 Gm17812-201ENSMUST00000204935 318 ntBASIC14.33□□□□□ -0.12
Ercc3P49135 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.33□□□□□ -0.12
Ercc3P49135 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ercc3P49135 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.33□□□□□ -0.12
Ercc3P49135 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ercc3P49135 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms