Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl28P41105 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Gm5124-202ENSMUST00000132683 2083 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Rpl28P41105 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC8.13□□□□□ -1.11
Rpl28P41105 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Rpl28P41105 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl28P41105 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 AC160405.1-201ENSMUST00000218207 1545 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Gm15897-201ENSMUST00000117770 1486 ntBASIC8.13□□□□□ -1.11
Rpl28P41105 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl28P41105 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Retreg1-206ENSMUST00000228306 1430 ntBASIC8.12□□□□□ -1.11
Rpl28P41105 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Gm43760-201ENSMUST00000202120 3015 ntBASIC8.12□□□□□ -1.11
Rpl28P41105 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Rpl28P41105 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Gm4984-201ENSMUST00000115987 360 ntBASIC8.12□□□□□ -1.11
Rpl28P41105 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC8.12□□□□□ -1.11
Rpl28P41105 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC8.12□□□□□ -1.11
Rpl28P41105 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rpl28P41105 Gm8810-201ENSMUST00000172895 754 ntBASIC8.12□□□□□ -1.11
Rpl28P41105 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Gm27839-201ENSMUST00000184242 106 ntBASIC8.12□□□□□ -1.11
Rpl28P41105 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Rpl28P41105 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Btrc-209ENSMUST00000224478 2194 ntBASIC8.12□□□□□ -1.11
Rpl28P41105 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC8.12□□□□□ -1.11
Rpl28P41105 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC8.12□□□□□ -1.11
Rpl28P41105 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Rpl28P41105 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl28P41105 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Rpl28P41105 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Gm29100-201ENSMUST00000187564 4410 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms