Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.07□□□□□ -0.8
Col8a2P25318 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.07□□□□□ -0.8
Col8a2P25318 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm22133-201ENSMUST00000102082 109 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm5419-201ENSMUST00000119301 527 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.07□□□□□ -0.8
Col8a2P25318 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm28686-201ENSMUST00000187404 609 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm44100-201ENSMUST00000204329 436 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.07□□□□□ -0.8
Col8a2P25318 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.07□□□□□ -0.8
Col8a2P25318 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Col8a2P25318 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.07□□□□□ -0.8
Col8a2P25318 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Col8a2P25318 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Col8a2P25318 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.07□□□□□ -0.8
Col8a2P25318 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Col8a2P25318 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Col8a2P25318 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms