Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Fv4P11370 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.67□□□□□ -0.54
Fv4P11370 Gm11531-201ENSMUST00000117614 555 ntBASIC11.67□□□□□ -0.54
Fv4P11370 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Fv4P11370 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.67□□□□□ -0.54
Fv4P11370 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.67□□□□□ -0.54
Fv4P11370 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Fv4P11370 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.67□□□□□ -0.54
Fv4P11370 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.67□□□□□ -0.54
Fv4P11370 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Fv4P11370 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.67□□□□□ -0.54
Fv4P11370 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Fv4P11370 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Fv4P11370 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Fv4P11370 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.67□□□□□ -0.54
Fv4P11370 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Fv4P11370 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Fv4P11370 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.66□□□□□ -0.54
Fv4P11370 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Fv4P11370 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Fv4P11370 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Fv4P11370 Gm15610-201ENSMUST00000120584 195 ntBASIC11.66□□□□□ -0.54
Fv4P11370 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.66□□□□□ -0.54
Fv4P11370 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.66□□□□□ -0.54
Fv4P11370 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.66□□□□□ -0.54
Fv4P11370 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.66□□□□□ -0.54
Fv4P11370 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.66□□□□□ -0.54
Fv4P11370 Morn2-202ENSMUST00000227729 656 ntBASIC11.66□□□□□ -0.54
Fv4P11370 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.66□□□□□ -0.54
Fv4P11370 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.66□□□□□ -0.54
Fv4P11370 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Fv4P11370 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fv4P11370 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Fv4P11370 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Fv4P11370 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fv4P11370 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Fv4P11370 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.65□□□□□ -0.54
Fv4P11370 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.65□□□□□ -0.54
Fv4P11370 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fv4P11370 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Fv4P11370 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Fv4P11370 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Fv4P11370 Gm25214-201ENSMUST00000104573 129 ntBASIC11.65□□□□□ -0.54
Fv4P11370 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Fv4P11370 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fv4P11370 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.65□□□□□ -0.54
Fv4P11370 Gm11793-201ENSMUST00000120433 981 ntBASIC11.65□□□□□ -0.54
Fv4P11370 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Fv4P11370 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Fv4P11370 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.65□□□□□ -0.54
Fv4P11370 Gm5745-201ENSMUST00000183748 313 ntBASIC11.65□□□□□ -0.54
Fv4P11370 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Fv4P11370 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Fv4P11370 Gm42627-201ENSMUST00000197347 224 ntBASIC11.65□□□□□ -0.54
Fv4P11370 Gm43118-201ENSMUST00000199149 775 ntBASIC11.65□□□□□ -0.54
Fv4P11370 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.65□□□□□ -0.54
Fv4P11370 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms