Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC8.82□□□□□ -1
TcraP01849 Gm37917-201ENSMUST00000194711 392 ntBASIC8.82□□□□□ -1
TcraP01849 Ighv8-10-201ENSMUST00000199579 358 ntBASIC8.82□□□□□ -1
TcraP01849 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
TcraP01849 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC8.82□□□□□ -1
TcraP01849 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Gm19692-201ENSMUST00000203856 2084 ntBASIC8.82□□□□□ -1
TcraP01849 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 AC154527.2-201ENSMUST00000225256 1466 ntBASIC8.82□□□□□ -1
TcraP01849 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
TcraP01849 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TcraP01849 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
TcraP01849 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Gm45677-201ENSMUST00000209975 1341 ntBASIC8.81□□□□□ -1
TcraP01849 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC8.81□□□□□ -1
TcraP01849 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC8.81□□□□□ -1
TcraP01849 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
TcraP01849 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC8.81□□□□□ -1
TcraP01849 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Gm13394-201ENSMUST00000121658 1000 ntBASIC8.81□□□□□ -1
TcraP01849 Gm14760-201ENSMUST00000121831 999 ntBASIC8.81□□□□□ -1
TcraP01849 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
TcraP01849 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC8.81□□□□□ -1
TcraP01849 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
TcraP01849 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
TcraP01849 AC125206.2-201ENSMUST00000217454 574 ntBASIC8.81□□□□□ -1
TcraP01849 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC8.81□□□□□ -1
TcraP01849 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC8.81□□□□□ -1
TcraP01849 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Gm9755-201ENSMUST00000032981 1356 ntBASIC8.81□□□□□ -1
TcraP01849 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
TcraP01849 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
TcraP01849 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC8.81□□□□□ -1
TcraP01849 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC8.81□□□□□ -1
TcraP01849 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC8.81□□□□□ -1
TcraP01849 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC8.8□□□□□ -1
TcraP01849 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 AC160405.1-201ENSMUST00000218207 1545 ntBASIC8.8□□□□□ -1
TcraP01849 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.8□□□□□ -1
TcraP01849 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC8.8□□□□□ -1
TcraP01849 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
TcraP01849 Gm5380-201ENSMUST00000119296 2136 ntBASIC8.8□□□□□ -1
TcraP01849 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC8.8□□□□□ -1
TcraP01849 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC8.8□□□□□ -1
TcraP01849 Gm12341-201ENSMUST00000119724 503 ntBASIC8.8□□□□□ -1
TcraP01849 Gm16342-201ENSMUST00000124025 1025 ntBASIC8.8□□□□□ -1
TcraP01849 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC8.8□□□□□ -1
TcraP01849 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC8.8□□□□□ -1
TcraP01849 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC8.8□□□□□ -1
TcraP01849 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC8.8□□□□□ -1
TcraP01849 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC8.8□□□□□ -1
TcraP01849 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC8.8□□□□□ -1
TcraP01849 AC155286.1-201ENSMUST00000218632 448 ntBASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms