Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh1F7BJK1 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh1F7BJK1 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.89□□□□□ -0.67
Pcdh1F7BJK1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh1F7BJK1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh1F7BJK1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh1F7BJK1 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh1F7BJK1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh1F7BJK1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Gm12502-201ENSMUST00000120197 444 ntBASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Gm7561-201ENSMUST00000211203 886 ntBASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Gm6091-201ENSMUST00000098307 165 ntBASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh1F7BJK1 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Gm5781-201ENSMUST00000219792 443 ntBASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Gm10268-201ENSMUST00000085340 555 ntBASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh1F7BJK1 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms