Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Gm11222-201ENSMUST00000119005 738 ntBASIC12.42□□□□□ -0.42
Atf6F6VAN0 Gm15547-201ENSMUST00000122152 333 ntBASIC12.42□□□□□ -0.42
Atf6F6VAN0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Atf6F6VAN0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.42□□□□□ -0.42
Atf6F6VAN0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Cts7-204ENSMUST00000225321 1257 ntBASIC12.42□□□□□ -0.42
Atf6F6VAN0 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.42□□□□□ -0.42
Atf6F6VAN0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.42□□□□□ -0.42
Atf6F6VAN0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.42□□□□□ -0.42
Atf6F6VAN0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.42□□□□□ -0.42
Atf6F6VAN0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atf6F6VAN0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Mir8109-201ENSMUST00000184375 117 ntBASIC12.41□□□□□ -0.42
Atf6F6VAN0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.41□□□□□ -0.42
Atf6F6VAN0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.41□□□□□ -0.42
Atf6F6VAN0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Gm10312-201ENSMUST00000078515 489 ntBASIC12.41□□□□□ -0.42
Atf6F6VAN0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.41□□□□□ -0.42
Atf6F6VAN0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Atf6F6VAN0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atf6F6VAN0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atf6F6VAN0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atf6F6VAN0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atf6F6VAN0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atf6F6VAN0 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.4□□□□□ -0.42
Atf6F6VAN0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atf6F6VAN0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atf6F6VAN0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.4□□□□□ -0.42
Atf6F6VAN0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.4□□□□□ -0.42
Atf6F6VAN0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.4□□□□□ -0.42
Atf6F6VAN0 Gm31256-201ENSMUST00000194705 506 ntBASIC12.4□□□□□ -0.42
Atf6F6VAN0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atf6F6VAN0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atf6F6VAN0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.4□□□□□ -0.42
Atf6F6VAN0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms