Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Gm13996-201ENSMUST00000118456 430 ntBASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Gm35960-201ENSMUST00000202712 767 ntBASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Gm8913-201ENSMUST00000209491 641 ntBASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.21□□□□□ -0.77
Cpsf4lE9Q2N0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cpsf4lE9Q2N0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Mir877-201ENSMUST00000104738 85 ntBASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gm14130-201ENSMUST00000118417 987 ntBASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gm17812-201ENSMUST00000204935 318 ntBASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cpsf4lE9Q2N0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms